发信人: crossrapids (大漠孤烟), 信区: Biology
标 题: Re: 怎么找到蛋白质的三维结构或者二维结构?
发信站: BBS 未名空间站 (Fri Aug 5 01:11:51 2005)



【 在 bmec (bmec) 的大作中提到: 】
: thx in advance...


For 3-dimensional structure: try PDB: http://www.rcsb.org/pdb/
If there is no crystal or NMR structure available, you can try some 3-
dimensional structure prediction program, like
SwissModel: http://swissmodel.expasy.org/

Robetta: http://robetta.bakerlab.org/

UCLA/DOE Protein Fold Server: http://fold.doe-mbi.ucla.edu/

3D-PSSM (Position Specific Scoring Matrix): http://www.sbg.bio.ic.ac.uk/~3dpssm/

123D: http://123d.ncifcrf.gov/

GeneThreader: http://bioinf.cs.ucl.ac.uk/psipred/


For 2-dimensional structure, there are many 2-dimensinal structure prediciton
programs:
The PSIPRED Protein Structure Prediction Server:

http://bioinf.cs.ucl.ac.uk/psipred/

CONSENSUS SECONDARY STRUCTURE PREDICTION

http://npsa-pbil.ibcp.fr/cgi-bin/npsa_automat.pl?page=/NPSA/npsa_seccons.html



PROF Secondary Structure Prediction System

http://www.aber.ac.uk/~phiwww/prof/






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